[Babase] Re: Upmpi ready-ish

Susan Alberts alberts at duke.edu
Tue Dec 15 10:25:35 EST 2009


Ok thanks. Do the rules allow two AS's to begin the interaction? If  
so, then we should have two AS's here. If not, then we probably need  
to change the rule. Also, it seems that we should change the seq = 1  
rule we talked about before, so that two AS's in a row (as in this  
case) can have seq = 1. Does this make sense?
S

On Dec 15, 2009, at 9:32 AM, Lacey Maryott Roerish wrote:

> 474	117	1.22	24/07/1999	DOX,VAT	AS	VIA					N
> 475	117	1.22	24/07/1999	VEI	+	VIA					
>
> On Tue, Dec 15, 2009 at 9:13 AM, Susan Alberts <alberts at duke.edu>  
> wrote:
> It looks to me like it should be two AS's.
>
> If you send me the whole MPI I might be able to comment more fully.
>
> S
>
>
> On Dec 15, 2009, at 9:08 AM, Lacey Maryott Roerish wrote:
>
> So I just came across an error regarding this error message.
>
> 474     117     1.22    24/07/1999      DOX,VAT AS       
> VIA                                     N
>
> Should this be changed to a VS?
>
> L
>
> On Mon, Dec 14, 2009 at 9:20 PM, Susan Alberts <alberts at duke.edu>  
> wrote:
>
>
> I think we want the original: "two rows can't both have seq = 1
> unless they are both "versus" interactions" unless you have
> some reason to want a change.
>
> Lacey and I have worked it out.
>
> OK
>
>
> S
>
>
>
>
>
> Karl <kop at meme.com>
> Free Software:  "You don't pay back, you pay forward."
>              -- Robert A. Heinlein
>
>
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> ------------------------------------------------------------
> Susan Alberts, Dept of Biology, Duke University, Box 90338, Durham  
> NC 27708. Phone 919-660-7272, FAX 919-660-7293
>
>
>
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>
>
> -- 
> - -
> Lacey K. Maryott Roerish
> Alberts Lab
> Department of Biology
> Duke University
> ph: 919-660-7306
> fax: 919-660-7293
> Lacey.Maryott at duke.edu
> _______________________________________________
> Babase mailing list
> Babase at www.eco.princeton.edu
> http://www.eco.princeton.edu/mailman/listinfo/babase
>
> ------------------------------------------------------------
> Susan Alberts, Dept of Biology, Duke University, Box 90338, Durham  
> NC 27708. Phone 919-660-7272, FAX 919-660-7293
>
>
>
> _______________________________________________
> Babase mailing list
> Babase at www.eco.princeton.edu
> http://www.eco.princeton.edu/mailman/listinfo/babase
>
>
>
> -- 
> - -
> Lacey K. Maryott Roerish
> Alberts Lab
> Department of Biology
> Duke University
> ph: 919-660-7306
> fax: 919-660-7293
> Lacey.Maryott at duke.edu
> _______________________________________________
> Babase mailing list
> Babase at www.eco.princeton.edu
> http://www.eco.princeton.edu/mailman/listinfo/babase

------------------------------------------------------------
Susan Alberts, Dept of Biology, Duke University, Box 90338, Durham NC  
27708. Phone 919-660-7272, FAX 919-660-7293





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