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| * [https://papio.biology.duke.edu/phpPgAdmin/ Access the Database Via phpPgAdmin] (You know you want to!) * [:BabaseTrainingCourse:Babase Training Course] * [:GettingStartedWithBabase:Getting Started With Babase] * [:SQLCourseLink:SQL Internet Resources] * [:SQL Language:SQL Language for Babase] * [:TheBabaseWiki:The Babase Wiki] -- The Babase website, you can help improve it! * [:BabaseGlossary:Babase Glossary v.1] * [:BabaseHelp:Babase Help] -- Other help links * [:BabaseQuiz:Babase Quiz] -- New Users must take this quiz before starting work with babase. See Niki or Lacey for information |
* [[https://papio.biology.duke.edu/phpPgAdmin/|Access the Database Via phpPgAdmin]] (You know you want to!) * [[BabaseTrainingCourse|Babase Training Course]] * [[GettingStartedWithBabase|Getting Started With Babase]] * [[SQLCourseLink|SQL Internet Resources]] * [[SQL_Language|SQL Language for Babase]] * [[TheBabaseWiki|The Babase Wiki]] -- The Babase website, you can help improve it! * [[BabaseGlossary|Babase Glossary v.1]] * [[BabaseHelp|Babase Help]] -- Other help links * [[BabaseQuiz|Babase Quiz]] -- New Users must take this quiz before starting work with babase. See Niki or Lacey for information |
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| * [:WhatIsBabase:About the Babase Software Project] * [:DocumentationLinks#techspecs:The Babase System Technical Specifications] * [:DocumentationLinks#pocketref:The Babase Pocket Reference] * [:DocumentationLinks#erdiagrams:Entity Relationship Diagrams] * [:BabasePending:Documentation for schemas other than babase] * [:DocumentationLinks:Other Babase Documentation] - Wish List, To Do's Etc |
* [[WhatIsBabase|About the Babase Software Project]] * [[DocumentationLinks#techspecs|The Babase System Technical Specifications]] * [[DocumentationLinks#pocketref|The Babase Pocket Reference]] * [[DocumentationLinks#erdiagrams|Entity Relationship Diagrams]] * [[BabasePending|Documentation for schemas other than babase]] * [[DocumentationLinks|Other Babase Documentation]] - Wish List, To Do's Etc |
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| * [:DataManagement:Data Management Tasks] - primarily for use by Niki and Patrick | * [[DataManagement|Data Management Tasks]] - primarily for use by Niki and Patrick |
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| [[Include(DatasetStatusTable)]][:DatasetStatus:Dataset status detail] | <<Include(DatasetStatusTable)>>[[DatasetStatus|Dataset status detail]] |
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| All of the Babase source code is freely available [:SourceCode:right here]. | All of the Babase source code is freely available [[SourceCode|right here]]. |
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| (Quick link to the [#mainmenu Main Menu]) | (Quick link to the [[#mainmenu|Main Menu]]) |
Babase -- The Wiki
Contents
Using Babase
Access the Database Via phpPgAdmin (You know you want to!)
The Babase Wiki -- The Babase website, you can help improve it!
Babase Help -- Other help links
Babase Quiz -- New Users must take this quiz before starting work with babase. See Niki or Lacey for information
Documentation
Other Babase Documentation - Wish List, To Do's Etc
Data Management Tasks
Data Management Tasks - primarily for use by Niki and Patrick
Status of Babase Datasets
Dataset |
Last Updated |
Data Included |
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Group Membership and Life Events* |
11 Aug 2023 |
Data through Jun 2023 |
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Demography backfill |
6 Dec 2023 |
Demography note and confidence assignment backfill - complete for Linda's, Weaver's, Omo's, Viola's, Nyayo's, Proton's, and Dotty's groups (though some ranks may require adjusting); Hook's group backfill for 1989-1994 complete; Alto's fission backfill (Jan 1989-Feb 1992) complete. Census (but not demography) backfill is also complete for Alto's from Sep 1980 onward and for Hook's from May 1983 onward. Most other groups censuses have also been backfilled with the exception of Stud's group. Lodge groups have not been backfilled. |
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Sexual Cycles** |
11 Aug 2023 |
Cycling data through Jun 2023 (data for the TZ loss and prior requires some correction now that cycgaps issues are fixed); sexskins and repro notes through Dec 2022 and backfilled through 1997 (except for Joy's and Nzige's 1997 data, which throw a lot of errors) |
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Interaction Data |
3 Nov 2022 |
Data through Jun 2022 |
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SWERB Data |
2x/ every week |
Data until ~(at most) 7 days previous to today |
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Rankdates Table |
23 May 2023 |
Data Through Mar 2023 (by dates assigned to obviously-adult immigrants and males > 7yrs, 5mos and residing in nonstudy groups updated through same quarter as demography and repro tables) |
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Ranks Table |
28 Jun 2022 |
ALM/ADM through Dec 2021; ALF/ADF through Dec 2021 |
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Min_Maxs view |
11 Aug 2023 |
temp and rain data from Aug 1976 through Jun 2023 |
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11 Aug 2023 |
WeatherHawk meterological data through Jun 2023 |
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Wounds and Pathologies |
11 Aug 2023 |
tables and views beginning with wp_ through Jun 2023 |
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Princeton babase_pending tables |
6 Dec 2023 |
neonatals, subgroups, intergroup_encounters, hybridity_rawmorpho, deaths, dispersenotes, & corpse_info through Sep 2023 |
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Duke babase_pending tables |
3 Nov 2022 |
Predation_By, Predation_On, Human_Disturb through Sep 2022 |
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Genetic Inventory |
Updated constantly, as needed |
Tissues that are or ever have been at Duke and Notre Dame, Extracted DNA's/RNA's |
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Hmm... |
Jan 2022 |
The below datasets have all moved around. We need to update those sections. |
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Genetic Markers: msat_reactions |
Apr 2018 |
Reaction info through plate 415 |
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Genetic Markers: msat_results |
Apr 2018 |
Results data through plate 415 |
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Genetic Markers: Genotypes |
Dec 2018 |
All finalized microsatellite genotypes through end of year 2018 |
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Hormone Samples |
May 2022 |
Fecal samples through 17 Apr 2021 |
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Hormone Preps and Results |
May 2022 |
All lab work done through 27 Apr 2022 |
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Source Code
All of the Babase source code is freely available right here.
(Quick link to the Main Menu)
Acknowledgments
We gratefully acknowledge the support of the National Science Foundation for the supporting the collection of the majority of the data stored in the database; in the past decade in particular we acknowledge support from IBN 9985910, IBN 0322613, IBN 0322781, BCS 0323553, BCS 0323596, DEB 0846286, DEB 0846532 and DEB 0919200. We are also very grateful for support from the National Institute of Aging (R01AG034513-01 and P01AG031719) and the Princeton Center for the Demography of Aging (P30AG024361). We also thank the Chicago Zoological Society, the Max Planck Institute for Demographic Research, the L.S.B. Leakey Foundation and the National Geographic Society for support at various times over the years.