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 * [https://papio.biology.duke.edu/phpPgAdmin/ phpPgAdmin] -- A web interface to the [http://www.postgresql.org/ PostgreSQL] database which stores all the Babase data. The authoritative Babase data is kept on the {{{papio.biology.duke.edu PostgreSQL server}}}, in the {{{babase}}} database, in the {{{babase}}} schema. ([http://phppgadmin.sourceforge.net documentation])  * [https://papio.biology.duke.edu/phpPgAdmin/ phpPgAdmin]
   -- A web interface to the [http://www.postgresql.org/ PostgreSQL] database which stores all the Babase data. The authoritative Babase data is kept on the {{{papio.biology.duke.edu PostgreSQL server}}}, in the {{{babase}}} database, in the {{{babase}}} schema. ([http://phppgadmin.sourceforge.net documentation])
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 * [https://papio.biology.duke.edu/programs/wwwdiff/ wwwdiff] -- Compare 2 files. Used for proofing; the procedure is to have two different people enter the same data and then compare the results. ([http://papio.biology.duke.edu/babase_system.html#Wwwdiff documentation])
 * [https://papio.biology.duke.edu/programs/upload/ upload] -- Upload a tab delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([http://papio.biology.duke.edu/babase_system.html#Upload documentation])
 * [https://papio.biology.duke.edu/programs/upcen/ upcen] -- Upload a tab delimited text file into the Census table. ([http://papio.biology.duke.edu/babase_system.html#Upcen documentation])
 * [https://papio.biology.duke.edu/programs/psionload/ psionload] -- Upload raw Psion data into Babase. ([http://papio.biology.duke.edu/babase_system#Psionload documentation])
 * [https://papio.biology.duke.edu/programs/upmpi/ upmpi] -- Upload a tab delimited text file into the MPI tables. ([http://papio.biology.duke.edu/babase_system/Upmpi documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=log updart Darting Logistic Data] -- Upload a tab delimited text file into the darting logistic related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=morpho updart Darting Morphology Data] -- Upload a tab delimited text file into the darting morphology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=physio updart Darting Physiology Data] -- Upload a tab delimited text file into the darting physiology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=samp updart Darting Sample Data] -- Upload a tab delimited text file into the darting physical sample related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=teeth updart Darting Tooth Data] -- Upload a tab delimited text file into the darting tooth related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=testes updart Darting Testes Data] -- Upload a tab delimited text file into the darting testes related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=ticks updart Darting Tick Data] -- Upload a tab delimited text file into the darting tick and other parasites related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation])
 * [https://papio.biology.duke.edu/ranker/ranker.jnlp ranker] -- The Ranker program; please refer to its [:RankerProgram:documentation] for prerequisites and instructions on how to launch it.
 * [https://papio.biology.duke.edu/programs/logout logout] -- Logout from the Babase program suite. ([http://papio.biology.duke.edu/babase_system#Logout documentation])		  * [https://papio.biology.duke.edu/programs/wwwdiff/ wwwdiff]
    -- Compare 2 files. Used for proofing; the procedure is to have two different people enter the same data and then compare the results. ([http://papio.biology.duke.edu/babase_system.html#Wwwdiff documentation])
 * [https://papio.biology.duke.edu/programs/upload/ upload]
    -- Upload a tab delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([http://papio.biology.duke.edu/babase_system.html#Upload documentation])
 * [https://papio.biology.duke.edu/programs/upcen/ upcen]
    -- Upload a tab delimited text file into the Census table. ([http://papio.biology.duke.edu/babase_system.html#Upcen documentation])
 * [https://papio.biology.duke.edu/programs/psionload/ psionload]
    -- Upload raw Psion data into Babase. ([http://papio.biology.duke.edu/babase_system#Psionload documentation])
 * [https://papio.biology.duke.edu/programs/upmpi/ upmpi]
    -- Upload a tab delimited text file into the MPI tables. ([http://papio.biology.duke.edu/babase_system/Upmpi documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=log updart Darting Logistic Data]
    -- Upload a tab delimited text file into the darting logistic related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-log logistic specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=morpho updart Darting Morphology Data]
    -- Upload a tab delimited text file into the darting morphology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-morpho morphology specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=physio updart Darting Physiology Data]
    -- Upload a tab delimited text file into the darting physiology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dphys physiology specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=samp updart Darting Sample Data]
    -- Upload a tab delimited text file into the darting physical sample related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dsamp sample specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=teeth updart Darting Tooth Data]
    -- Upload a tab delimited text file into the darting tooth related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-teeth tooth specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=testes_arc updart Darting Testes Circumference Data]
    -- Upload a tab delimited text file into the darting testes circumference related tables. (TESTES_ARC) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=testes_diam updart Darting Testes Diameter Data]
    -- Upload a tab delimited text file into the darting testes diameter related tables. (TESTES_DIAM) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation])
 * [https://papio.biology.duke.edu/programs/updart/?darttype=ticks updart Darting Tick Data]
    -- Upload a tab delimited text file into the darting tick and other parasites related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-tick tick specific documentation])
 * [https://papio.biology.duke.edu/ranker/ranker.jnlp ranker]
    -- The Ranker program; please refer to its [:RankerProgram:documentation] for prerequisites and instructions on how to launch it.
 * [https://papio.biology.duke.edu/programs/logout logout]
    -- Logout from the Babase program suite. ([http://papio.biology.duke.edu/babase_system#Logout documentation])

Programs

Generic Programs

Babase's Bespoke Programs

ProgramLinks (last edited 2024-12-11 20:18:34 by JakeGordon)

Wiki content based upon work supported by the National Science Foundation under Grant Nos. 0323553 and 0323596. Any opinions, findings, conclusions or recommendations expressed in this material are those of the wiki contributor(s) and do not necessarily reflect the views of the National Science Foundation.