|
Size: 1978
Comment: Add upmpi.
|
Size: 4987
Comment: Link to updart data specific docs
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 1: | Line 1: |
| ## ## Note, the url of this page is linked to in the programs so the name of this page should ## not be changed without taking this into account. ## |
|
| Line 4: | Line 8: |
| * [https://papio.biology.duke.edu/phpPgadmin/ phpPgAdmin] -- A web interface to the [http://www.postgresql.org/ PostgreSQL] database which stores all the Babase data. The authoritative Babase data is kept on the {{{papio.biology.duke.edu PostgreSQL server}}}, in the {{{babase}}} database, in the {{{babase}}} schema. ([http://phppgadmin.sourceforge.net documentation]) | * [https://papio.biology.duke.edu/phpPgAdmin/ phpPgAdmin] -- A web interface to the [http://www.postgresql.org/ PostgreSQL] database which stores all the Babase data. The authoritative Babase data is kept on the {{{papio.biology.duke.edu PostgreSQL server}}}, in the {{{babase}}} database, in the {{{babase}}} schema. ([http://phppgadmin.sourceforge.net documentation]) |
| Line 8: | Line 12: |
| * [https://papio.biology.duke.edu/programs/wwwdiff/ wwwdiff] -- Compare 2 files. Used for proofing; the procedure is to have two different people enter the same data and then compare the results. ([https://papio.biology.duke.edu/babase_system.html#Wwwdiff documentation]) * [https://papio.biology.duke.edu/programs/upload/ upload] -- Upload a tab delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([https://papio.biology.duke.edu/babase_system.html#Upload documentation]) * [https://papio.biology.duke.edu/programs/upcen/ upcen] -- Upload a tab delimited text file into the Census table. ([https://papio.biology.duke.edu/babase_system.html#Upcen documentation]) * [https://papio.biology.duke.edu/programs/psionload/ psionload] -- Upload raw Psion data into Babase. ([https://papio.biology.duke.edu/babase_system#Psionload documentation]) * [https://papio.biology.duke.edu/programs/upmpi/ upmpi] -- Upload a tab delimited text file into the MPI tables. ([https://papio.biology.duke.edu/babase_system/Upmpi documentation]) |
* [https://papio.biology.duke.edu/programs/wwwdiff/ wwwdiff] -- Compare 2 files. Used for proofing; the procedure is to have two different people enter the same data and then compare the results. ([http://papio.biology.duke.edu/babase_system.html#Wwwdiff documentation]) * [https://papio.biology.duke.edu/programs/upload/ upload] -- Upload a tab delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([http://papio.biology.duke.edu/babase_system.html#Upload documentation]) * [https://papio.biology.duke.edu/programs/upcen/ upcen] -- Upload a tab delimited text file into the Census table. ([http://papio.biology.duke.edu/babase_system.html#Upcen documentation]) * [https://papio.biology.duke.edu/programs/psionload/ psionload] -- Upload raw Psion data into Babase. ([http://papio.biology.duke.edu/babase_system#Psionload documentation]) * [https://papio.biology.duke.edu/programs/upmpi/ upmpi] -- Upload a tab delimited text file into the MPI tables. ([http://papio.biology.duke.edu/babase_system/Upmpi documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=log updart Darting Logistic Data] -- Upload a tab delimited text file into the darting logistic related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-log logistic specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=morpho updart Darting Morphology Data] -- Upload a tab delimited text file into the darting morphology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-morpho morphology specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=physio updart Darting Physiology Data] -- Upload a tab delimited text file into the darting physiology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dphys physiology specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=samp updart Darting Sample Data] -- Upload a tab delimited text file into the darting physical sample related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dsamp sample specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=teeth updart Darting Tooth Data] -- Upload a tab delimited text file into the darting tooth related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-teeth tooth specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=testes_arc updart Darting Testes Circumference Data] -- Upload a tab delimited text file into the darting testes circumference related tables. (TESTES_ARC) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=testes_diam updart Darting Testes Diameter Data] -- Upload a tab delimited text file into the darting testes diameter related tables. (TESTES_DIAM) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=ticks updart Darting Tick Data] -- Upload a tab delimited text file into the darting tick and other parasites related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-tick tick specific documentation]) |
| Line 14: | Line 26: |
| * [https://papio.biology.duke.edu/programs/logout logout] -- Logout from the Babase program suite. ([https://papio.biology.duke.edu/babase_system#Logout documentation]) | * [https://papio.biology.duke.edu/programs/logout logout] -- Logout from the Babase program suite. ([http://papio.biology.duke.edu/babase_system#Logout documentation]) |
Programs
Generic Programs
[https://papio.biology.duke.edu/phpPgAdmin/ phpPgAdmin] -- A web interface to the [http://www.postgresql.org/ PostgreSQL] database which stores all the Babase data. The authoritative Babase data is kept on the papio.biology.duke.edu PostgreSQL server, in the babase database, in the babase schema. ([http://phppgadmin.sourceforge.net documentation])
Babase's Bespoke Programs
[https://papio.biology.duke.edu/programs/wwwdiff/ wwwdiff] -- Compare 2 files. Used for proofing; the procedure is to have two different people enter the same data and then compare the results. ([http://papio.biology.duke.edu/babase_system.html#Wwwdiff documentation])
[https://papio.biology.duke.edu/programs/upload/ upload] -- Upload a tab delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([http://papio.biology.duke.edu/babase_system.html#Upload documentation])
[https://papio.biology.duke.edu/programs/upcen/ upcen] -- Upload a tab delimited text file into the Census table. ([http://papio.biology.duke.edu/babase_system.html#Upcen documentation])
[https://papio.biology.duke.edu/programs/psionload/ psionload] -- Upload raw Psion data into Babase. ([http://papio.biology.duke.edu/babase_system#Psionload documentation])
[https://papio.biology.duke.edu/programs/upmpi/ upmpi] -- Upload a tab delimited text file into the MPI tables. ([http://papio.biology.duke.edu/babase_system/Upmpi documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=log updart Darting Logistic Data] -- Upload a tab delimited text file into the darting logistic related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-log logistic specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=morpho updart Darting Morphology Data] -- Upload a tab delimited text file into the darting morphology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-morpho morphology specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=physio updart Darting Physiology Data] -- Upload a tab delimited text file into the darting physiology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dphys physiology specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=samp updart Darting Sample Data] -- Upload a tab delimited text file into the darting physical sample related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dsamp sample specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=teeth updart Darting Tooth Data] -- Upload a tab delimited text file into the darting tooth related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-teeth tooth specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=testes_arc updart Darting Testes Circumference Data] -- Upload a tab delimited text file into the darting testes circumference related tables. (TESTES_ARC) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=testes_diam updart Darting Testes Diameter Data] -- Upload a tab delimited text file into the darting testes diameter related tables. (TESTES_DIAM) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation])
[https://papio.biology.duke.edu/programs/updart/?darttype=ticks updart Darting Tick Data] -- Upload a tab delimited text file into the darting tick and other parasites related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-tick tick specific documentation])
[https://papio.biology.duke.edu/ranker/ranker.jnlp ranker] -- The Ranker program; please refer to its [:RankerProgram:documentation] for prerequisites and instructions on how to launch it.
[https://papio.biology.duke.edu/programs/logout logout] -- Logout from the Babase program suite. ([http://papio.biology.duke.edu/babase_system#Logout documentation])