|
Size: 5066
Comment: Change layout style of menus
|
Size: 2060
Comment: Update for papio migration; remove photo organizer and wwwdiff and all the upload programs replaced by views, add copy schema and bulk upload
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 8: | Line 8: |
| * [https://papio.biology.duke.edu/phpPgAdmin/ phpPgAdmin] -- A web interface to the [http://www.postgresql.org/ PostgreSQL] database which stores all the Babase data. The authoritative Babase data is kept on the {{{papio.biology.duke.edu PostgreSQL server}}}, in the {{{babase}}} database, in the {{{babase}}} schema. ([http://phppgadmin.sourceforge.net documentation]) |
* [[https://papio.biology.duke.edu/phpPgAdmin/|phpPgAdmin]] -- A web interface to the [[http://www.postgresql.org/|PostgreSQL]] database which stores all the Babase data. The authoritative Babase data is kept on the {{{papio.biology.duke.edu PostgreSQL server}}}, in the {{{babase}}} database, in the {{{babase}}} schema. ([[http://phppgadmin.sourceforge.net|documentation]]) |
| Line 13: | Line 13: |
| * [https://papio.biology.duke.edu/programs/wwwdiff/ wwwdiff] -- Compare 2 files. Used for proofing; the procedure is to have two different people enter the same data and then compare the results. ([http://papio.biology.duke.edu/babase_system.html#Wwwdiff documentation]) * [https://papio.biology.duke.edu/programs/upload/ upload] -- Upload a tab delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([http://papio.biology.duke.edu/babase_system.html#Upload documentation]) * [https://papio.biology.duke.edu/programs/upcen/ upcen] -- Upload a tab delimited text file into the Census table. ([http://papio.biology.duke.edu/babase_system.html#Upcen documentation]) * [https://papio.biology.duke.edu/programs/psionload/ psionload] -- Upload raw Psion data into Babase. ([http://papio.biology.duke.edu/babase_system#Psionload documentation]) * [https://papio.biology.duke.edu/programs/upmpi/ upmpi] -- Upload a tab delimited text file into the MPI tables. ([http://papio.biology.duke.edu/babase_system/Upmpi documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=log updart Darting Logistic Data] -- Upload a tab delimited text file into the darting logistic related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-log logistic specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=morpho updart Darting Morphology Data] -- Upload a tab delimited text file into the darting morphology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-morpho morphology specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=physio updart Darting Physiology Data] -- Upload a tab delimited text file into the darting physiology related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dphys physiology specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=samp updart Darting Sample Data] -- Upload a tab delimited text file into the darting physical sample related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-dsamp sample specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=teeth updart Darting Tooth Data] -- Upload a tab delimited text file into the darting tooth related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-teeth tooth specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=testes_arc updart Darting Testes Circumference Data] -- Upload a tab delimited text file into the darting testes circumference related tables. (TESTES_ARC) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=testes_diam updart Darting Testes Diameter Data] -- Upload a tab delimited text file into the darting testes diameter related tables. (TESTES_DIAM) ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-testes testes specific documentation]) * [https://papio.biology.duke.edu/programs/updart/?darttype=ticks updart Darting Tick Data] -- Upload a tab delimited text file into the darting tick and other parasites related tables. ([http://papio.biology.duke.edu/babase_system.html#Updart documentation], [http://papio.biology.duke.edu/babase_system.html#updart-tick tick specific documentation]) * [https://papio.biology.duke.edu/ranker/ranker.jnlp ranker] -- The Ranker program; please refer to its [:RankerProgram:documentation] for prerequisites and instructions on how to launch it. * [https://papio.biology.duke.edu/programs/logout logout] -- Logout from the Babase program suite. ([http://papio.biology.duke.edu/babase_system#Logout documentation]) |
* [[https://papio.biology.duke.edu/programs/upload/|upload]] -- Upload a delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. ([[https://papio.biology.duke.edu/babase_system.html#Upload|documentation]]) * [[https://papio.biology.duke.edu/programs/copy|copy schema]] -- Copy a Schema Between Databases ([[https://papio-test.biology.duke.edu/gitweb/?p=pgwui_copy;a=blob_plain;f=README.rst;hb=HEAD|documentation]]) * [[https://papio.biology.duke.edu/programs/bulk_upload|bulk upload]] -- Upload multiple files into multiple tables or views, in an all-or-nothing way. ([[https://papio.biology.duke.edu/gitweb/?p=pgwui_bulk_upload;a=blob_plain;f=README.rst;hb=HEAD|documentation]]) * [[https://papio.biology.duke.edu/programs/upcen|update census]] -- Upload census-formatted data into the CENSUS table. ([[https://papio.biology.duke.edu/babase_system_html/Data-Maintenance-Programs.html#Upcen|documentation]]) * [[https://papio.biology.duke.edu/ranker/ranker.jnlp|ranker]] -- The Ranker program; please refer to its [[RankerProgram|documentation]] for prerequisites and instructions on how to launch it. * [[https://papio.biology.duke.edu/programs/logout|logout]] -- Logout from the Babase program suite. ([[https://papio.biology.duke.edu/babase_system.html#Logout|documentation]]) |
Programs
Generic Programs
-- A web interface to the PostgreSQL database which stores all the Babase data. The authoritative Babase data is kept on the papio.biology.duke.edu PostgreSQL server, in the babase database, in the babase schema. (documentation)
Babase's Bespoke Programs
-- Upload a delimited text file into the database. Useful because it will upload into views as well as tables. Several Babase datasets are updated using this program. (documentation)
-- Copy a Schema Between Databases (documentation)
-- Upload multiple files into multiple tables or views, in an all-or-nothing way. (documentation)
-- Upload census-formatted data into the CENSUS table. (documentation)
-- The Ranker program; please refer to its documentation for prerequisites and instructions on how to launch it.
-- Logout from the Babase program suite. (documentation)