Differences between revisions 15 and 30 (spanning 15 versions)
Revision 15 as of 2011-04-04 20:27:55
Size: 2236
Editor: KarlPinc
Comment: Add swerb notebook
Revision 30 as of 2022-12-15 15:54:47
Size: 2547
Editor: JakeGordon
Comment: Remove Chado
Deletions are marked like this. Additions are marked like this.
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You probably already know Babase's purpose and background but we keep [[WhatIsBabase|an explanation]] around to which we direct the general public.
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You probably already know Babase's purpose and background but we keep [:WhatIsBabase:an explanation] around to which we direct the general public. <<Anchor(techspecs)>>
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[[Anchor(techspecs)]]
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This document describes the data structures and capabilities of Babase.
It does not describe which of these capabilities are in use,
how the data is collected, or the procedures used by the
Babase team members when collecting, storing, and maintaining the data.
This document describes the data structures and capabilities of Babase. It does not describe which of these capabilities are in use, how the data is collected, or the procedures used by the Babase team members when collecting, storing, and maintaining the data.
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 * [http://papio.biology.duke.edu/babase_system_html/ in separate pages] -- for quick page loads
 * [http://papio.biology.duke.edu/babase_system.html as one big page] -- for easy searching
 * [[https://papio.biology.duke.edu/babase_system_html/|in separate pages]] -- for quick page loads
 * [[https://papio.biology.duke.edu/babase_system.html|as one big page]] -- for easy searching
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 * [http://papio.biology.duke.edu/babase_system.txt in a normal width] -- to fit on a page
 * [http://papio.biology.duke.edu/thin.txt in a narrow width] -- for easy reading
 * [[https://papio.biology.duke.edu/babase_system.txt|in a normal width]] -- to fit on a page
 * [[https://papio.biology.duke.edu/thin.txt|in a narrow width]] -- for easy reading
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[http://papio.biology.duke.edu/babase_system.xml As XML] [[https://papio.biology.duke.edu/babase_system.xml|As XML]]
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[[Anchor(pocketref)]] <<Anchor(pocketref)>>
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 * [http://papio.biology.duke.edu/pocket_reference.pdf a PDF]
 * [http://papio.biology.duke.edu/pocket_reference.html web content]
 * [[https://papio.biology.duke.edu/pocket_reference.pdf|a PDF]]
 * [[https://papio.biology.duke.edu/pocket_reference.html|web content]]
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[[Anchor(erdiagrams)]] <<Anchor(erdiagrams)>>
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[[https://papio.biology.duke.edu/diagrams/|The Entity Relationship diagrams]] are graphical representations of the database structure. They are incorporated into the documentation but are also available as individual documents in various image formats. <<Anchor(otherdocs)>>
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[http://papio.biology.duke.edu/diagrams/ The Entity Relationship diagrams] are graphical representations of the database structure. They are incorporated into the documentation but are also available as individual documents in various image formats.
[[Anchor(otherdocs)]]
<<Anchor(otherdocumentation)>>
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 * [:
DatabaseBackups:Backing up the database] -- Accept no substitutes!
 * [:OSBackups:Administration Guide to Backups of the Entire Computer]
 * [:
BabaseHelp:Babase Help] -- Other help links
 * [:ToDo:Changes we want to make to Babase]
 * Email thread detailing [http://eeblistserv.princeton.edu/pipermail/babase/2010-May/003662.html how to merge 2 individuals]
 * [:
SwerbNotebook:SWERB Notebook] -- a collection of information about SWERB data
 * [[BabaseVPN]] -- Installing and using the Babase VPN
 * [[
DatabaseBackups|Backing up the database]] -- Accept no substitutes!
 * [[OSBackups|Administration Guide to Backups of the Entire Computer]]
 * [[
BabaseHelp|Babase Help]] -- Other help links
 * [[ToDo|Changes we want to make to Babase]]
 * Email thread detailing [[http://eeblistserv.princeton.edu/pipermail/babase/2010-May/003662.html|how to merge 2 individuals]]
 * [[MisIDs|Mis-ID's and Multiple Names]] -- List of large-scale mis-ID cases
 * [[
SwerbNotebook|SWERB Notebook]] -- a collection of information about SWERB data
 * [[PsionFormat|The Psion Data Format (Version 703)]]
 * [[EmpCollaboration | EMP collaboration documentation]]

Documentation

You probably already know Babase's purpose and background but we keep an explanation around to which we direct the general public.

The Babase System Technical Specifications

This document describes the data structures and capabilities of Babase. It does not describe which of these capabilities are in use, how the data is collected, or the procedures used by the Babase team members when collecting, storing, and maintaining the data.

This document is available in several forms.

As web content:

As plain text:

As XML

The Babase Pocket Reference

A brief summary of Babase. A listing of the tables, views, and the ER diagrams that describe the overall structure of the database. It is available as:

Entity Relationship Diagrams

The Entity Relationship diagrams are graphical representations of the database structure. They are incorporated into the documentation but are also available as individual documents in various image formats.

Other Babase Documentation

DocumentationLinks (last edited 2024-12-19 21:33:08 by KarlPinc)

Wiki content based upon work supported by the National Science Foundation under Grant Nos. 0323553 and 0323596. Any opinions, findings, conclusions or recommendations expressed in this material are those of the wiki contributor(s) and do not necessarily reflect the views of the National Science Foundation.